Primer
Part:BBa_K3103009:Design
Designed by: Devdhi Kasana and Sadie Meunier Group: iGEM19_IIT_Chicago (2019-10-16)
pETse_int_N_r
Assembly Compatibility:
- 10COMPATIBLE WITH RFC[10]
- 12COMPATIBLE WITH RFC[12]
- 21COMPATIBLE WITH RFC[21]
- 23COMPATIBLE WITH RFC[23]
- 25COMPATIBLE WITH RFC[25]
- 1000COMPATIBLE WITH RFC[1000]
Design Notes
We did an initial screening with the sequencing primers that flank the gene insertion site in the vector backbone. Every plasmid backbone has a _f and_r sequencing primer which is used to sequencing interred genes, and can also be used to PCR the insert up. When screening by PCR we looked for a specific size (size of insert plus flanking sequence). To confirm OUR gene was inserted, we wanted a specific primer which only amplified our gene of interest. This is a lot more diagnostic. We did this by making primers specific to the gene, and using one of the _f or _r primers in conjunction with the sequencing _r and _f primers.
Source
pCS-PET_VB190412